CNER: A TOOLKIT FOR EXPLORING EXTREME NONCODING CONSERVATION.

CNEr: A toolkit for exploring extreme noncoding conservation.

Conserved Noncoding Elements (CNEs) are elements exhibiting extreme noncoding conservation in Metazoan genomes.They cluster around developmental genes and act as long-range enhancers, yet nothing that we know Eye makeup about their function explains the observed conservation levels.Clusters of CNEs coincide with topologically associating domains (T

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